Refactoring start scripts: adapt coupling scripts, call SLURM directly without the detour via cmd files

move scripts for magicc into the folder core/magicc, delete outdated script performance_test.R, integrate script submit_compare.cmd into multiComparison.R

Refactoring start scripts: adapt coupling scripts (get rid of *.cmd files by creating the SLURM command on the fly)

Refactoring start scripts: - delete start_functions.R because all it's functions have been replaced by new ones
- fix bugs and correct formatting in other files

Refactoring start scripts: - moved the definition of the slurm strings from  submit() in submit.R to choose_submit() in start.R
- renamed the function choose_submit() to choose_slurmConfig() and moved it to the new file choose_slurmConfig.R

Refactoring: -start scripts (part 5): renamed submit_run(cfg) into submit.R(cfg), deleted conopt files

Refactoring: - part 2: restructure start scripts (try to minimize workload for the login node on the cluster when starting a REMIND run by moving code into scripts that are included in the slurm job)

Refactoring: - restructure start scripts (try to minimize workload for the login node on the cluster when starting a REMIND run by moving code into scripts that are included in the slurm job)

Refactoring (cleaning)

Refactoring - delete realization linadjust of module 45_carbonprice, general code cleaning (mainly start_functions.R)

             - remove old_cluster

refactoring - delete old files from core/input/files

documentation in main.gms extended

Completed documentation for 30_biomass/magpie_40 and 26_agcost/cost

restore defaults, remove magicc binary from ds2unix system call

*refactoring* Deleted q30_pebiolc_price_base and vm_pebiolc_price_shifted since it was a remainder of old implementations and had no function anymore.

Update scenario_config_SSPSDP.csv, move old scenario_config_* files t…

Fix naming inconsistencies revealed by codeCheck

These are mainly naming inconsitencies in the welfare module.

Welfare module

Feature regional sensitvities