Skip to content
Snippets Groups Projects
Commit 16d1a452 authored by Felix Schreyer's avatar Felix Schreyer
Browse files

change cluster access section

parent efa2f975
No related branches found
No related tags found
1 merge request!28add to model output tutorial
......@@ -40,13 +40,12 @@ Looking at the *REMIND_generic_NameofYourRun.mif*, the column **scenario** gives
### 3.1 Access Cluster
To analyze your model results, you can load the output of the mif-file into a local session in RStudio. To get the file from the cluster, one way is to download the mif-file, for example, via WinSCP. Another way is to mount your cluster folder as a network drive on your local computer. However, you will be only be able to access the cluster folder like this as long as you are in the PIK-network. For working in the PIK-network, though, mounting can be quite convenient. Then, you can directly plug in the path to your mounted network drive in the above command.
To analyze your model results, you can load the output of the mif-file into a local session in RStudio. To get the file from the cluster, you can download the mif-file, for example, via WinSCP. You can read more details on how to access the cluster here:
https://redmine.pik-potsdam.de/projects/mo/wiki/Getting_ready_to_use_the_Cluster
For mounting a cluster folder in Windows: Open the explorer -> right-click on Computer -> "map network drive" -> insert "\\\\CLUSTERFS\\Path\\to\\Folder". Often, people work in their tmp-folders, e.g. "\\\\CLUSTERFS\\tmp\\YourUsername". For mounting a cluster folder in Linux, insert in the command line correspondingly:
``` r
sshfs -o reconnect,ServerAliveInterval=15 -o follow_symlinks USERNAME@cluster.pik-potsdam.de:/PATH/TO/DIR /home/USERNAME/YOURLOCALPATH
```
### 3.2 Load mif file as Magpie Object
You can load the mif-file of your run into a magpie object from the **magclass** R library by
......
0% Loading or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment