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Small changes for NDC, NPi and ENGAGE scenarios

Jerome Hilaire requested to merge github/fork/christophbertram/develop into develop

Created by: christophbertram

Hi Lavinia, the test runs are currently running, but as the change only was a change in location of the prepareNDC code within prepare_and_submit.R, I think it is save to already commit this now... Cheers

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