Single-region runs started via config file report OUT_OF_MEMORY
Created by: Loisel
When starting a testOneRegi
run on the cluster by changing the config file instead of using the --testOneRegi
flag to start.R
, the run reports via email (subject, body is empty)
SLURM Job_id=16067591 Name=default Ended, Run time 00:09:58, OUT_OF_MEMORY
Checking the output, /p/tmp/aloisdir/remind/output/default_2020-04-16_10.30.13
, everything seems to be fine (except MAGICC) but validation seems to fail. Log says
[1] "Executing reporting.R"
/p/tmp/aloisdir/remind/output/default_2020-04-16_10.30.13/magicc
At line 1299 of file MAGICC_6005_v2_forJessicaGunnarElmar.F90 (unit = 42, file = 'MAGCFG_NMLYEARS.CFG')
Fortran runtime error: End of file
sh: climate_reporting_template.txt: No such file or directory
sed: can't read ../../../output/default_2020-04-16_10.30.13/REMIND_climate_default.mif: No such file or directory
cat: ../../../output/default_2020-04-16_10.30.13/REMIND_climate_default.mif: No such file or directory
Joining, by = c("region", "tech", "rlf")
Joining, by = "opTimeYr"
Joining, by = "tech"
Joining, by = c("opTimeYr", "fuel")
Joining, by = c("region", "tech")
Joining, by = c("region", "tech")
Joining, by = c("region", "period", "tech")
Joining, by = "tech"
Joining, by = c("region", "period", "tech")
Joining, by = c("region", "period", "tech")
[1] "Executing validation.R"
/var/spool/slurmd/job16067591/slurm_script: line 4: 21304 Killed Rscript prepare_and_run.R
slurmstepd: error: Detected 1 oom-kill event(s) in step 16067591.batch cgroup.
REMIND version is 998771da3af9b243925161105ff86e5cd865b0d9
, no changes to config apart from cfg$gms$optimization <- "testOneRegi"
.