require(rmarkdown)

## run EDGE transport validation output if required
if(cfg$gms$transport == "edge_esm"){
  md_template <- "EDGETransportReport.Rmd"
  file.copy(file.path("./scripts/output/single/notebook_templates", md_template), outputdir)
  rmarkdown::render(path(outputdir, md_template), output_format="pdf_document")
  if(cfg$gms$c_keep_iteration_gdxes == 1){
    md_template <- "EDGETransportMultiIterationAnalysis.Rmd"
    file.copy(file.path("./scripts/output/single/notebook_templates", md_template), outputdir)
    rmarkdown::render(path(outputdir, md_template), output_format="pdf_document")
  }
}