From 698da77b0a4f87731a1c5d253f54f8282129d735 Mon Sep 17 00:00:00 2001
From: David Klein <dklein@pik-potsdam.de>
Date: Thu, 12 Mar 2020 14:28:24 +0100
Subject: [PATCH] Add .Rprofile to the list of files that are copied into the
results folder *before* prepare_and_run is called.
---
scripts/start/submit.R | 3 ++-
1 file changed, 2 insertions(+), 1 deletion(-)
diff --git a/scripts/start/submit.R b/scripts/start/submit.R
index abf4cb3..d991727 100644
--- a/scripts/start/submit.R
+++ b/scripts/start/submit.R
@@ -43,7 +43,8 @@ submit <- function(cfg, restart = FALSE) {
save(cfg,file=filename)
# Copy files required to confiugre and start a run
- filelist <- c("prepare_and_run.R" = "scripts/start/prepare_and_run.R")
+ filelist <- c("prepare_and_run.R" = "scripts/start/prepare_and_run.R",
+ ".Rprofile" = ".Rprofile")
.copy.fromlist(filelist,cfg$results_folder)
# Do not remove .RData files from REMIND main folder because they are needed in case you need to manually restart subsequent runs.
--
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